gpu-pairAlign (G-PAS 1.0)

The software may be freely used for academic and research purposes. Please cite us as follows:
"Protein alignment algorithms with an efficient backtracking routine on multiple GPUs"
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzynka, Erwin Pesch and Pawel Wojciechowski
BMC Bioinformatics 2011, 12:181

Software requirements:

  • Linux operating system
  • g++ compiler
  • make
  • CUDA 2.0 or higher
  • CUDA-compliant GPU

License: GNU GPLv3

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