gpu-pairAlign (G-PAS 1.0)
The software may be freely used for academic and research purposes. Please cite us as follows:
"Protein alignment algorithms with an efficient backtracking routine on multiple GPUs"
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzynka, Erwin Pesch and Pawel Wojciechowski
BMC Bioinformatics 2011, 12:181
Software requirements:
- Linux operating system
- g++ compiler
- make
- CUDA 2.0 or higher
- CUDA-compliant GPU
License: GNU GPLv3